Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim45Q6PFY8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.65■□□□□ 0.58
Trim45Q6PFY8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim45Q6PFY8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim45Q6PFY8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim45Q6PFY8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim45Q6PFY8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim45Q6PFY8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim45Q6PFY8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim45Q6PFY8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim45Q6PFY8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim45Q6PFY8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim45Q6PFY8 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.63■□□□□ 0.57
Trim45Q6PFY8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim45Q6PFY8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.63■□□□□ 0.57
Trim45Q6PFY8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim45Q6PFY8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim45Q6PFY8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim45Q6PFY8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim45Q6PFY8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim45Q6PFY8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim45Q6PFY8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim45Q6PFY8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim45Q6PFY8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim45Q6PFY8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim45Q6PFY8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim45Q6PFY8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim45Q6PFY8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim45Q6PFY8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Gm43530-201ENSMUST00000195920 274 ntBASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Serp2-204ENSMUST00000228055 705 ntBASIC18.6■□□□□ 0.57
Trim45Q6PFY8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim45Q6PFY8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim45Q6PFY8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.58■□□□□ 0.57
Trim45Q6PFY8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim45Q6PFY8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim45Q6PFY8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim45Q6PFY8 Gm43137-201ENSMUST00000198052 594 ntBASIC18.58■□□□□ 0.56
Trim45Q6PFY8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim45Q6PFY8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim45Q6PFY8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim45Q6PFY8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim45Q6PFY8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim45Q6PFY8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim45Q6PFY8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms