Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sox17Q61473 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.57■□□□□ 0.56
Sox17Q61473 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sox17Q61473 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox17Q61473 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox17Q61473 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sox17Q61473 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox17Q61473 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.56■□□□□ 0.56
Sox17Q61473 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox17Q61473 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sox17Q61473 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox17Q61473 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox17Q61473 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox17Q61473 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox17Q61473 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox17Q61473 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox17Q61473 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox17Q61473 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox17Q61473 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox17Q61473 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.55■□□□□ 0.56
Sox17Q61473 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox17Q61473 Gm12366-201ENSMUST00000121722 873 ntBASIC18.55■□□□□ 0.56
Sox17Q61473 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.55■□□□□ 0.56
Sox17Q61473 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.55■□□□□ 0.56
Sox17Q61473 Gm5786-201ENSMUST00000085368 882 ntBASIC18.55■□□□□ 0.56
Sox17Q61473 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox17Q61473 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox17Q61473 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox17Q61473 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox17Q61473 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox17Q61473 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox17Q61473 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.54■□□□□ 0.56
Sox17Q61473 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox17Q61473 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox17Q61473 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox17Q61473 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox17Q61473 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox17Q61473 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox17Q61473 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.53■□□□□ 0.56
Sox17Q61473 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.53■□□□□ 0.56
Sox17Q61473 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Sox17Q61473 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Sox17Q61473 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox17Q61473 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox17Q61473 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox17Q61473 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox17Q61473 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox17Q61473 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox17Q61473 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox17Q61473 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sox17Q61473 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox17Q61473 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sox17Q61473 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox17Q61473 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sox17Q61473 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox17Q61473 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sox17Q61473 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sox17Q61473 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.51■□□□□ 0.55
Sox17Q61473 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox17Q61473 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox17Q61473 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sox17Q61473 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox17Q61473 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox17Q61473 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox17Q61473 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox17Q61473 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox17Q61473 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox17Q61473 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms