Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn4Q61418 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Clcn4Q61418 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn4Q61418 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.18■□□□□ 0.5
Clcn4Q61418 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn4Q61418 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.18■□□□□ 0.5
Clcn4Q61418 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn4Q61418 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn4Q61418 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.18■□□□□ 0.5
Clcn4Q61418 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn4Q61418 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn4Q61418 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn4Q61418 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn4Q61418 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.18■□□□□ 0.5
Clcn4Q61418 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn4Q61418 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn4Q61418 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn4Q61418 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.17■□□□□ 0.5
Clcn4Q61418 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn4Q61418 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn4Q61418 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn4Q61418 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn4Q61418 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn4Q61418 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn4Q61418 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn4Q61418 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn4Q61418 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn4Q61418 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn4Q61418 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.15■□□□□ 0.5
Clcn4Q61418 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn4Q61418 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn4Q61418 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Clcn4Q61418 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn4Q61418 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn4Q61418 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Clcn4Q61418 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Clcn4Q61418 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn4Q61418 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn4Q61418 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn4Q61418 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.15■□□□□ 0.5
Clcn4Q61418 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn4Q61418 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Clcn4Q61418 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Clcn4Q61418 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn4Q61418 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clcn4Q61418 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clcn4Q61418 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn4Q61418 Gm12922-201ENSMUST00000120626 809 ntBASIC18.14■□□□□ 0.49
Clcn4Q61418 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.14■□□□□ 0.49
Clcn4Q61418 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Clcn4Q61418 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn4Q61418 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn4Q61418 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Clcn4Q61418 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn4Q61418 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn4Q61418 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.13■□□□□ 0.49
Clcn4Q61418 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn4Q61418 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.13■□□□□ 0.49
Clcn4Q61418 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn4Q61418 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn4Q61418 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn4Q61418 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Clcn4Q61418 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.13■□□□□ 0.49
Clcn4Q61418 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Clcn4Q61418 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clcn4Q61418 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn4Q61418 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn4Q61418 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn4Q61418 Gm7143-201ENSMUST00000222811 859 ntBASIC18.12■□□□□ 0.49
Clcn4Q61418 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn4Q61418 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn4Q61418 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn4Q61418 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn4Q61418 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clcn4Q61418 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcn4Q61418 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.11■□□□□ 0.49
Clcn4Q61418 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn4Q61418 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn4Q61418 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn4Q61418 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.11■□□□□ 0.49
Clcn4Q61418 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn4Q61418 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn4Q61418 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn4Q61418 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn4Q61418 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Clcn4Q61418 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Clcn4Q61418 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcn4Q61418 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn4Q61418 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clcn4Q61418 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.1■□□□□ 0.49
Clcn4Q61418 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.1■□□□□ 0.49
Clcn4Q61418 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Clcn4Q61418 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcn4Q61418 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn4Q61418 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn4Q61418 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn4Q61418 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn4Q61418 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn4Q61418 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.09■□□□□ 0.49
Clcn4Q61418 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms