Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Satb1Q60611 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Satb1Q60611 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Satb1Q60611 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Satb1Q60611 Smad6-203ENSMUST00000179458 273 ntBASIC20.46■□□□□ 0.87
Satb1Q60611 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.46■□□□□ 0.87
Satb1Q60611 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.46■□□□□ 0.87
Satb1Q60611 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Satb1Q60611 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Satb1Q60611 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Satb1Q60611 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Satb1Q60611 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Satb1Q60611 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.45■□□□□ 0.86
Satb1Q60611 Gm12441-201ENSMUST00000121806 588 ntBASIC20.45■□□□□ 0.86
Satb1Q60611 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.45■□□□□ 0.86
Satb1Q60611 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.45■□□□□ 0.86
Satb1Q60611 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.45■□□□□ 0.86
Satb1Q60611 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Satb1Q60611 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Satb1Q60611 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Satb1Q60611 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Satb1Q60611 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Satb1Q60611 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.44■□□□□ 0.86
Satb1Q60611 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Satb1Q60611 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Satb1Q60611 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Satb1Q60611 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Satb1Q60611 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Satb1Q60611 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Satb1Q60611 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.43■□□□□ 0.86
Satb1Q60611 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.43■□□□□ 0.86
Satb1Q60611 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Satb1Q60611 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Satb1Q60611 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Satb1Q60611 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.43■□□□□ 0.86
Satb1Q60611 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Satb1Q60611 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Satb1Q60611 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.42■□□□□ 0.86
Satb1Q60611 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Satb1Q60611 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Satb1Q60611 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Satb1Q60611 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Satb1Q60611 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Satb1Q60611 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
Satb1Q60611 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Satb1Q60611 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Satb1Q60611 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Satb1Q60611 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Satb1Q60611 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.41■□□□□ 0.86
Satb1Q60611 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Satb1Q60611 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Satb1Q60611 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Satb1Q60611 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.41■□□□□ 0.86
Satb1Q60611 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Satb1Q60611 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Satb1Q60611 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.41■□□□□ 0.86
Satb1Q60611 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Satb1Q60611 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Satb1Q60611 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Satb1Q60611 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Satb1Q60611 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Satb1Q60611 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Satb1Q60611 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Satb1Q60611 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Satb1Q60611 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Satb1Q60611 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Satb1Q60611 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Satb1Q60611 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Satb1Q60611 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Satb1Q60611 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Satb1Q60611 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Satb1Q60611 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Satb1Q60611 Gm7977-201ENSMUST00000193787 748 ntBASIC20.39■□□□□ 0.85
Satb1Q60611 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.39■□□□□ 0.85
Satb1Q60611 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Satb1Q60611 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Satb1Q60611 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Satb1Q60611 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.38■□□□□ 0.85
Satb1Q60611 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Satb1Q60611 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
Satb1Q60611 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Satb1Q60611 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Satb1Q60611 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Satb1Q60611 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Satb1Q60611 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Satb1Q60611 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Satb1Q60611 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Satb1Q60611 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Satb1Q60611 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Satb1Q60611 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Satb1Q60611 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.37■□□□□ 0.85
Satb1Q60611 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.37■□□□□ 0.85
Satb1Q60611 Gm20760-201ENSMUST00000179197 648 ntBASIC20.37■□□□□ 0.85
Satb1Q60611 Gm27801-201ENSMUST00000184174 223 ntBASIC20.37■□□□□ 0.85
Satb1Q60611 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.37■□□□□ 0.85
Satb1Q60611 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Satb1Q60611 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Satb1Q60611 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.37■□□□□ 0.85
Satb1Q60611 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Satb1Q60611 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms