Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Naf1Q3UMQ8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Naf1Q3UMQ8 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.18■□□□□ 0.82
Naf1Q3UMQ8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Naf1Q3UMQ8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Naf1Q3UMQ8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Naf1Q3UMQ8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 Gm5874-201ENSMUST00000096101 508 ntBASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Naf1Q3UMQ8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Naf1Q3UMQ8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Naf1Q3UMQ8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Naf1Q3UMQ8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.15■□□□□ 0.82
Naf1Q3UMQ8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Naf1Q3UMQ8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Naf1Q3UMQ8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Naf1Q3UMQ8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Naf1Q3UMQ8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Naf1Q3UMQ8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Naf1Q3UMQ8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Naf1Q3UMQ8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Naf1Q3UMQ8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Naf1Q3UMQ8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Naf1Q3UMQ8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Gm10493-201ENSMUST00000097270 612 ntBASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Naf1Q3UMQ8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 Gm11421-201ENSMUST00000122124 294 ntBASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms