Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Col5a2Q3U962 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col5a2Q3U962 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col5a2Q3U962 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col5a2Q3U962 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
Col5a2Q3U962 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Col5a2Q3U962 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col5a2Q3U962 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col5a2Q3U962 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.93■■□□□ 1.42
Col5a2Q3U962 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.93■■□□□ 1.42
Col5a2Q3U962 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.93■■□□□ 1.42
Col5a2Q3U962 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col5a2Q3U962 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.92■■□□□ 1.42
Col5a2Q3U962 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col5a2Q3U962 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col5a2Q3U962 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col5a2Q3U962 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col5a2Q3U962 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col5a2Q3U962 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Col5a2Q3U962 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Col5a2Q3U962 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col5a2Q3U962 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Col5a2Q3U962 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col5a2Q3U962 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.9■■□□□ 1.42
Col5a2Q3U962 Gm37856-201ENSMUST00000191634 999 ntBASIC23.9■■□□□ 1.42
Col5a2Q3U962 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col5a2Q3U962 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col5a2Q3U962 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.42
Col5a2Q3U962 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col5a2Q3U962 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.89■■□□□ 1.42
Col5a2Q3U962 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Col5a2Q3U962 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Col5a2Q3U962 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Col5a2Q3U962 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Col5a2Q3U962 Gm7977-201ENSMUST00000193787 748 ntBASIC23.88■■□□□ 1.41
Col5a2Q3U962 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col5a2Q3U962 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col5a2Q3U962 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
Col5a2Q3U962 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col5a2Q3U962 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col5a2Q3U962 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col5a2Q3U962 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Col5a2Q3U962 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.87■■□□□ 1.41
Col5a2Q3U962 AC158538.1-201ENSMUST00000225870 294 ntBASIC23.87■■□□□ 1.41
Col5a2Q3U962 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col5a2Q3U962 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Col5a2Q3U962 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col5a2Q3U962 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Col5a2Q3U962 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col5a2Q3U962 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Col5a2Q3U962 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.87■■□□□ 1.41
Col5a2Q3U962 Gm6211-202ENSMUST00000167849 925 ntBASIC23.87■■□□□ 1.41
Col5a2Q3U962 Gm26524-201ENSMUST00000192339 390 ntBASIC23.87■■□□□ 1.41
Col5a2Q3U962 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col5a2Q3U962 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Col5a2Q3U962 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col5a2Q3U962 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Col5a2Q3U962 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.86■■□□□ 1.41
Col5a2Q3U962 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Col5a2Q3U962 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.86■■□□□ 1.41
Col5a2Q3U962 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Col5a2Q3U962 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col5a2Q3U962 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.85■■□□□ 1.41
Col5a2Q3U962 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.85■■□□□ 1.41
Col5a2Q3U962 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col5a2Q3U962 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col5a2Q3U962 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col5a2Q3U962 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col5a2Q3U962 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col5a2Q3U962 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.85■■□□□ 1.41
Col5a2Q3U962 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Col5a2Q3U962 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col5a2Q3U962 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col5a2Q3U962 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col5a2Q3U962 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col5a2Q3U962 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.84■■□□□ 1.41
Col5a2Q3U962 Gm29241-201ENSMUST00000189260 1096 ntBASIC23.84■■□□□ 1.41
Col5a2Q3U962 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.84■■□□□ 1.41
Col5a2Q3U962 Gm5408-201ENSMUST00000197998 747 ntBASIC23.84■■□□□ 1.41
Col5a2Q3U962 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col5a2Q3U962 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.84■■□□□ 1.41
Col5a2Q3U962 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col5a2Q3U962 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col5a2Q3U962 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Col5a2Q3U962 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col5a2Q3U962 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.83■■□□□ 1.41
Col5a2Q3U962 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.83■■□□□ 1.41
Col5a2Q3U962 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col5a2Q3U962 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col5a2Q3U962 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col5a2Q3U962 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col5a2Q3U962 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col5a2Q3U962 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Col5a2Q3U962 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC23.82■■□□□ 1.4
Col5a2Q3U962 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.82■■□□□ 1.4
Col5a2Q3U962 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col5a2Q3U962 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Col5a2Q3U962 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Col5a2Q3U962 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms