Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ush2AQ2QI47 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ush2AQ2QI47 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ush2AQ2QI47 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ush2AQ2QI47 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC10.92□□□□□ -0.66
Ush2AQ2QI47 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ush2AQ2QI47 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ush2AQ2QI47 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Gm10167-201ENSMUST00000150411 1479 ntBASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ush2AQ2QI47 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.9□□□□□ -0.66
Ush2AQ2QI47 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ush2AQ2QI47 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ush2AQ2QI47 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ush2AQ2QI47 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ush2AQ2QI47 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ush2AQ2QI47 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ush2AQ2QI47 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ush2AQ2QI47 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ush2AQ2QI47 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.87□□□□□ -0.67
Ush2AQ2QI47 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Gm5417-201ENSMUST00000079706 384 ntBASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Ank2-226ENSMUST00000189368 339 ntBASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Rab3c-203ENSMUST00000224180 967 ntBASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ush2AQ2QI47 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ush2AQ2QI47 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms