Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd3Q0EEE2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd3Q0EEE2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd3Q0EEE2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ptchd3Q0EEE2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ptchd3Q0EEE2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 Gm5812-201ENSMUST00000061073 957 ntBASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ptchd3Q0EEE2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd3Q0EEE2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd3Q0EEE2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd3Q0EEE2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd3Q0EEE2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd3Q0EEE2 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.03■□□□□ 0.64
Ptchd3Q0EEE2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd3Q0EEE2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ptchd3Q0EEE2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd3Q0EEE2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ptchd3Q0EEE2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ptchd3Q0EEE2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ptchd3Q0EEE2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ptchd3Q0EEE2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Ptchd3Q0EEE2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ptchd3Q0EEE2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Gm10399-202ENSMUST00000202768 748 ntBASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd3Q0EEE2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd3Q0EEE2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd3Q0EEE2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd3Q0EEE2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd3Q0EEE2 Gm43909-201ENSMUST00000203443 1876 ntBASIC19■□□□□ 0.63
Ptchd3Q0EEE2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19■□□□□ 0.63
Ptchd3Q0EEE2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ptchd3Q0EEE2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd3Q0EEE2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.99■□□□□ 0.63
Ptchd3Q0EEE2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.99■□□□□ 0.63
Ptchd3Q0EEE2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ptchd3Q0EEE2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
Ptchd3Q0EEE2 Gm15546-201ENSMUST00000122095 826 ntBASIC18.99■□□□□ 0.63
Ptchd3Q0EEE2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.99■□□□□ 0.63
Ptchd3Q0EEE2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ptchd3Q0EEE2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ptchd3Q0EEE2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ptchd3Q0EEE2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd3Q0EEE2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms