Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne2P59108 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne2P59108 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne2P59108 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne2P59108 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne2P59108 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne2P59108 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne2P59108 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne2P59108 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne2P59108 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne2P59108 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne2P59108 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cpne2P59108 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.6■□□□□ 0.25
Cpne2P59108 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne2P59108 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.6■□□□□ 0.25
Cpne2P59108 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.6■□□□□ 0.25
Cpne2P59108 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne2P59108 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cpne2P59108 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpne2P59108 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cpne2P59108 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne2P59108 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne2P59108 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne2P59108 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne2P59108 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cpne2P59108 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne2P59108 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne2P59108 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne2P59108 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Cpne2P59108 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cpne2P59108 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne2P59108 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpne2P59108 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.58■□□□□ 0.25
Cpne2P59108 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cpne2P59108 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cpne2P59108 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne2P59108 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.58■□□□□ 0.24
Cpne2P59108 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne2P59108 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne2P59108 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Cpne2P59108 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne2P59108 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne2P59108 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cpne2P59108 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne2P59108 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne2P59108 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne2P59108 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.57■□□□□ 0.24
Cpne2P59108 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne2P59108 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne2P59108 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.57■□□□□ 0.24
Cpne2P59108 Gm45444-201ENSMUST00000211394 898 ntBASIC16.57■□□□□ 0.24
Cpne2P59108 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cpne2P59108 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cpne2P59108 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne2P59108 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpne2P59108 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cpne2P59108 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.56■□□□□ 0.24
Cpne2P59108 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.56■□□□□ 0.24
Cpne2P59108 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cpne2P59108 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Cpne2P59108 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cpne2P59108 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cpne2P59108 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.55■□□□□ 0.24
Cpne2P59108 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.55■□□□□ 0.24
Cpne2P59108 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cpne2P59108 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cpne2P59108 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne2P59108 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne2P59108 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne2P59108 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Cpne2P59108 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne2P59108 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne2P59108 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne2P59108 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne2P59108 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cpne2P59108 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms