Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdkn2bP55271 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cdkn2bP55271 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkn2bP55271 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdkn2bP55271 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn2bP55271 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn2bP55271 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn2bP55271 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn2bP55271 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn2bP55271 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn2bP55271 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.02■□□□□ 0.64
Cdkn2bP55271 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cdkn2bP55271 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Cdkn2bP55271 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdkn2bP55271 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdkn2bP55271 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdkn2bP55271 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdkn2bP55271 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn2bP55271 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cdkn2bP55271 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.01■□□□□ 0.63
Cdkn2bP55271 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn2bP55271 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.01■□□□□ 0.63
Cdkn2bP55271 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn2bP55271 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn2bP55271 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn2bP55271 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn2bP55271 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn2bP55271 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkn2bP55271 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkn2bP55271 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkn2bP55271 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19■□□□□ 0.63
Cdkn2bP55271 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkn2bP55271 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkn2bP55271 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cdkn2bP55271 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkn2bP55271 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkn2bP55271 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkn2bP55271 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Gm43530-201ENSMUST00000195920 274 ntBASIC18.98■□□□□ 0.63
Cdkn2bP55271 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cdkn2bP55271 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn2bP55271 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn2bP55271 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Cdkn2bP55271 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn2bP55271 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.97■□□□□ 0.63
Cdkn2bP55271 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn2bP55271 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn2bP55271 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn2bP55271 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.96■□□□□ 0.63
Cdkn2bP55271 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.96■□□□□ 0.63
Cdkn2bP55271 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Cdkn2bP55271 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkn2bP55271 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkn2bP55271 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkn2bP55271 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkn2bP55271 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkn2bP55271 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkn2bP55271 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.95■□□□□ 0.62
Cdkn2bP55271 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkn2bP55271 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkn2bP55271 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Cdkn2bP55271 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkn2bP55271 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkn2bP55271 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkn2bP55271 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cdkn2bP55271 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkn2bP55271 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkn2bP55271 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cdkn2bP55271 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms