Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hmga2P52927 Mir6538-201ENSMUST00000183713 110 ntBASIC16.87■□□□□ 0.29
Hmga2P52927 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hmga2P52927 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hmga2P52927 Gm7143-201ENSMUST00000222811 859 ntBASIC16.87■□□□□ 0.29
Hmga2P52927 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmga2P52927 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hmga2P52927 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hmga2P52927 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga2P52927 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga2P52927 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Hmga2P52927 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga2P52927 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hmga2P52927 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hmga2P52927 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga2P52927 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga2P52927 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga2P52927 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hmga2P52927 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Hmga2P52927 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.85■□□□□ 0.29
Hmga2P52927 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.85■□□□□ 0.29
Hmga2P52927 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hmga2P52927 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.85■□□□□ 0.29
Hmga2P52927 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga2P52927 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Hmga2P52927 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.84■□□□□ 0.29
Hmga2P52927 Gm10399-202ENSMUST00000202768 748 ntBASIC16.84■□□□□ 0.29
Hmga2P52927 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.84■□□□□ 0.29
Hmga2P52927 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.84■□□□□ 0.29
Hmga2P52927 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga2P52927 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.84■□□□□ 0.29
Hmga2P52927 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hmga2P52927 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hmga2P52927 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hmga2P52927 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Hmga2P52927 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hmga2P52927 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga2P52927 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hmga2P52927 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga2P52927 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hmga2P52927 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmga2P52927 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmga2P52927 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.83■□□□□ 0.28
Hmga2P52927 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga2P52927 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga2P52927 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga2P52927 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmga2P52927 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga2P52927 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga2P52927 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga2P52927 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga2P52927 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga2P52927 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga2P52927 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Hmga2P52927 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga2P52927 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga2P52927 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.82■□□□□ 0.28
Hmga2P52927 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga2P52927 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hmga2P52927 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hmga2P52927 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga2P52927 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga2P52927 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga2P52927 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga2P52927 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga2P52927 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga2P52927 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga2P52927 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga2P52927 Gm45444-201ENSMUST00000211394 898 ntBASIC16.81■□□□□ 0.28
Hmga2P52927 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms