Protein–RNA interactions for Protein: P51612

Xpc, DNA repair protein complementing XP-C cells homolog, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XpcP51612 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
XpcP51612 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
XpcP51612 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
XpcP51612 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.29■■□□□ 1.48
XpcP51612 Reep4-203ENSMUST00000226563 1444 ntBASIC24.29■■□□□ 1.48
XpcP51612 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
XpcP51612 Mir5133-201ENSMUST00000174955 77 ntBASIC24.29■■□□□ 1.48
XpcP51612 Gm8520-201ENSMUST00000186517 868 ntBASIC24.29■■□□□ 1.48
XpcP51612 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
XpcP51612 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC24.29■■□□□ 1.48
XpcP51612 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
XpcP51612 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
XpcP51612 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
XpcP51612 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
XpcP51612 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.29■■□□□ 1.48
XpcP51612 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
XpcP51612 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.28■■□□□ 1.48
XpcP51612 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
XpcP51612 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
XpcP51612 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
XpcP51612 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
XpcP51612 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
XpcP51612 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
XpcP51612 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.27■■□□□ 1.48
XpcP51612 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
XpcP51612 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.27■■□□□ 1.48
XpcP51612 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
XpcP51612 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
XpcP51612 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
XpcP51612 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
XpcP51612 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
XpcP51612 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
XpcP51612 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
XpcP51612 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
XpcP51612 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
XpcP51612 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
XpcP51612 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC24.26■■□□□ 1.47
XpcP51612 Gm7514-201ENSMUST00000209475 934 ntBASIC24.26■■□□□ 1.47
XpcP51612 Ap3s1-204ENSMUST00000225520 957 ntBASIC24.26■■□□□ 1.47
XpcP51612 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
XpcP51612 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
XpcP51612 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.25■■□□□ 1.47
XpcP51612 Gm12527-201ENSMUST00000117967 564 ntBASIC24.25■■□□□ 1.47
XpcP51612 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC24.25■■□□□ 1.47
XpcP51612 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC24.25■■□□□ 1.47
XpcP51612 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
XpcP51612 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.25■■□□□ 1.47
XpcP51612 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
XpcP51612 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
XpcP51612 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
XpcP51612 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
XpcP51612 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
XpcP51612 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC24.24■■□□□ 1.47
XpcP51612 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
XpcP51612 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
XpcP51612 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.23■■□□□ 1.47
XpcP51612 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.23■■□□□ 1.47
XpcP51612 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC24.23■■□□□ 1.47
XpcP51612 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.23■■□□□ 1.47
XpcP51612 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
XpcP51612 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
XpcP51612 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
XpcP51612 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.23■■□□□ 1.47
XpcP51612 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
XpcP51612 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
XpcP51612 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.22■■□□□ 1.47
XpcP51612 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
XpcP51612 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
XpcP51612 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.22■■□□□ 1.47
XpcP51612 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
XpcP51612 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
XpcP51612 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
XpcP51612 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
XpcP51612 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
XpcP51612 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
XpcP51612 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
XpcP51612 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
XpcP51612 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.21■■□□□ 1.47
XpcP51612 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.21■■□□□ 1.47
XpcP51612 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
XpcP51612 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
XpcP51612 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
XpcP51612 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
XpcP51612 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
XpcP51612 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
XpcP51612 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC24.2■■□□□ 1.47
XpcP51612 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
XpcP51612 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
XpcP51612 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.2■■□□□ 1.46
XpcP51612 Gm42555-201ENSMUST00000199304 1039 ntBASIC24.2■■□□□ 1.46
XpcP51612 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC24.2■■□□□ 1.46
XpcP51612 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.2■■□□□ 1.46
XpcP51612 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.19■■□□□ 1.46
XpcP51612 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
XpcP51612 Gm14281-201ENSMUST00000121700 1294 ntBASIC24.19■■□□□ 1.46
XpcP51612 Gm7977-201ENSMUST00000193787 748 ntBASIC24.19■■□□□ 1.46
XpcP51612 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
XpcP51612 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
XpcP51612 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
XpcP51612 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms