Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SnrpbP27048 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SnrpbP27048 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SnrpbP27048 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SnrpbP27048 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SnrpbP27048 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SnrpbP27048 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.33■□□□□ 0.36
SnrpbP27048 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SnrpbP27048 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SnrpbP27048 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SnrpbP27048 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SnrpbP27048 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SnrpbP27048 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.32■□□□□ 0.36
SnrpbP27048 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SnrpbP27048 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SnrpbP27048 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.31■□□□□ 0.36
SnrpbP27048 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.31■□□□□ 0.36
SnrpbP27048 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SnrpbP27048 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SnrpbP27048 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SnrpbP27048 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SnrpbP27048 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.31■□□□□ 0.36
SnrpbP27048 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SnrpbP27048 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SnrpbP27048 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SnrpbP27048 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
SnrpbP27048 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SnrpbP27048 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SnrpbP27048 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SnrpbP27048 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.3■□□□□ 0.36
SnrpbP27048 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.3■□□□□ 0.36
SnrpbP27048 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SnrpbP27048 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.3■□□□□ 0.36
SnrpbP27048 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SnrpbP27048 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SnrpbP27048 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SnrpbP27048 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SnrpbP27048 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SnrpbP27048 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SnrpbP27048 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SnrpbP27048 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SnrpbP27048 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SnrpbP27048 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SnrpbP27048 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SnrpbP27048 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SnrpbP27048 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.28■□□□□ 0.36
SnrpbP27048 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SnrpbP27048 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SnrpbP27048 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SnrpbP27048 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SnrpbP27048 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SnrpbP27048 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SnrpbP27048 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SnrpbP27048 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SnrpbP27048 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SnrpbP27048 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SnrpbP27048 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms