Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P06320 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC12.53□□□□□ -0.4
P06320 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06320 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06320 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06320 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06320 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC12.53□□□□□ -0.4
P06320 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06320 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06320 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P06320 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P06320 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P06320 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06320 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
P06320 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06320 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06320 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06320 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06320 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06320 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P06320 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06320 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06320 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06320 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06320 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06320 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06320 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P06320 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06320 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P06320 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P06320 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P06320 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC12.51□□□□□ -0.41
P06320 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
P06320 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P06320 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06320 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P06320 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06320 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P06320 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC12.5□□□□□ -0.41
P06320 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06320 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P06320 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06320 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC12.5□□□□□ -0.41
P06320 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
P06320 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06320 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P06320 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
P06320 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
P06320 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC12.49□□□□□ -0.41
P06320 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Gm37035-201ENSMUST00000194809 2148 ntBASIC12.49□□□□□ -0.41
P06320 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC12.49□□□□□ -0.41
P06320 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Gm6311-201ENSMUST00000073790 878 ntBASIC12.49□□□□□ -0.41
P06320 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC12.49□□□□□ -0.41
P06320 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P06320 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
P06320 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P06320 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms