Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TcraP01849 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.42□□□□□ -0.1
TcraP01849 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TcraP01849 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TcraP01849 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TcraP01849 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.41□□□□□ -0.1
TcraP01849 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.41□□□□□ -0.1
TcraP01849 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.41□□□□□ -0.1
TcraP01849 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
TcraP01849 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TcraP01849 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TcraP01849 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TcraP01849 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TcraP01849 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TcraP01849 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TcraP01849 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TcraP01849 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TcraP01849 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TcraP01849 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.4□□□□□ -0.1
TcraP01849 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TcraP01849 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TcraP01849 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TcraP01849 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TcraP01849 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TcraP01849 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.39□□□□□ -0.11
TcraP01849 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TcraP01849 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TcraP01849 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.39□□□□□ -0.11
TcraP01849 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.39□□□□□ -0.11
TcraP01849 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TcraP01849 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.39□□□□□ -0.11
TcraP01849 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TcraP01849 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TcraP01849 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TcraP01849 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TcraP01849 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TcraP01849 Golph3-205ENSMUST00000228671 2842 ntBASIC14.37□□□□□ -0.11
TcraP01849 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.37□□□□□ -0.11
TcraP01849 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TcraP01849 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms