Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Prom1O54990 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.06■■□□□ 1.12
Prom1O54990 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Prom1O54990 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Prom1O54990 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Prom1O54990 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Prom1O54990 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Prom1O54990 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Prom1O54990 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.04■■□□□ 1.12
Prom1O54990 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Prom1O54990 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Prom1O54990 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Prom1O54990 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Prom1O54990 Gm13234-201ENSMUST00000120010 747 ntBASIC22.03■■□□□ 1.12
Prom1O54990 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Prom1O54990 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.03■■□□□ 1.12
Prom1O54990 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.03■■□□□ 1.12
Prom1O54990 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.03■■□□□ 1.12
Prom1O54990 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Prom1O54990 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Prom1O54990 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Prom1O54990 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.02■■□□□ 1.12
Prom1O54990 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Prom1O54990 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.02■■□□□ 1.12
Prom1O54990 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.02■■□□□ 1.12
Prom1O54990 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.02■■□□□ 1.12
Prom1O54990 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Prom1O54990 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prom1O54990 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
Prom1O54990 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Prom1O54990 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Prom1O54990 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prom1O54990 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prom1O54990 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Prom1O54990 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22■■□□□ 1.11
Prom1O54990 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22■■□□□ 1.11
Prom1O54990 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22■■□□□ 1.11
Prom1O54990 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Prom1O54990 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22■■□□□ 1.11
Prom1O54990 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Prom1O54990 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Prom1O54990 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Prom1O54990 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22■■□□□ 1.11
Prom1O54990 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.99■■□□□ 1.11
Prom1O54990 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Prom1O54990 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Prom1O54990 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prom1O54990 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prom1O54990 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prom1O54990 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prom1O54990 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prom1O54990 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prom1O54990 Gm27801-201ENSMUST00000184174 223 ntBASIC21.98■■□□□ 1.11
Prom1O54990 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.98■■□□□ 1.11
Prom1O54990 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prom1O54990 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prom1O54990 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prom1O54990 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prom1O54990 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.98■■□□□ 1.11
Prom1O54990 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prom1O54990 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prom1O54990 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.97■■□□□ 1.11
Prom1O54990 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.97■■□□□ 1.11
Prom1O54990 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.97■■□□□ 1.11
Prom1O54990 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prom1O54990 Gm10602-201ENSMUST00000098239 609 ntBASIC21.97■■□□□ 1.11
Prom1O54990 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prom1O54990 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prom1O54990 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Prom1O54990 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Prom1O54990 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Prom1O54990 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.96■■□□□ 1.11
Prom1O54990 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Prom1O54990 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.96■■□□□ 1.11
Prom1O54990 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Prom1O54990 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Prom1O54990 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Prom1O54990 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prom1O54990 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
Prom1O54990 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prom1O54990 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Prom1O54990 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Prom1O54990 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.95■■□□□ 1.1
Prom1O54990 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prom1O54990 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prom1O54990 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prom1O54990 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.95■■□□□ 1.1
Prom1O54990 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prom1O54990 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prom1O54990 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.94■■□□□ 1.1
Prom1O54990 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Prom1O54990 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.93■■□□□ 1.1
Prom1O54990 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Prom1O54990 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.93■■□□□ 1.1
Prom1O54990 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Prom1O54990 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Prom1O54990 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prom1O54990 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Prom1O54990 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prom1O54990 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms