Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Gfra3O35118 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gfra3O35118 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gfra3O35118 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gfra3O35118 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gfra3O35118 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gfra3O35118 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gfra3O35118 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gfra3O35118 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gfra3O35118 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gfra3O35118 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.12■□□□□ 0.33
Gfra3O35118 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gfra3O35118 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gfra3O35118 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gfra3O35118 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gfra3O35118 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gfra3O35118 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gfra3O35118 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gfra3O35118 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.11■□□□□ 0.33
Gfra3O35118 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gfra3O35118 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gfra3O35118 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gfra3O35118 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gfra3O35118 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gfra3O35118 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gfra3O35118 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Gfra3O35118 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gfra3O35118 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gfra3O35118 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gfra3O35118 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gfra3O35118 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gfra3O35118 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Gfra3O35118 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Gfra3O35118 Gm26833-201ENSMUST00000180899 440 ntBASIC17.09■□□□□ 0.33
Gfra3O35118 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.09■□□□□ 0.33
Gfra3O35118 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Gfra3O35118 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gfra3O35118 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Gfra3O35118 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gfra3O35118 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gfra3O35118 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.08■□□□□ 0.33
Gfra3O35118 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gfra3O35118 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gfra3O35118 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gfra3O35118 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gfra3O35118 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gfra3O35118 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gfra3O35118 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gfra3O35118 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gfra3O35118 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gfra3O35118 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gfra3O35118 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gfra3O35118 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gfra3O35118 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gfra3O35118 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Gfra3O35118 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.07■□□□□ 0.32
Gfra3O35118 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gfra3O35118 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.06■□□□□ 0.32
Gfra3O35118 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gfra3O35118 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gfra3O35118 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gfra3O35118 Smad6-203ENSMUST00000179458 273 ntBASIC17.06■□□□□ 0.32
Gfra3O35118 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.06■□□□□ 0.32
Gfra3O35118 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gfra3O35118 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.06■□□□□ 0.32
Gfra3O35118 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gfra3O35118 Gm40848-201ENSMUST00000221998 324 ntBASIC17.06■□□□□ 0.32
Gfra3O35118 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gfra3O35118 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.06■□□□□ 0.32
Gfra3O35118 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.06■□□□□ 0.32
Gfra3O35118 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gfra3O35118 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gfra3O35118 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gfra3O35118 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gfra3O35118 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gfra3O35118 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.05■□□□□ 0.32
Gfra3O35118 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.05■□□□□ 0.32
Gfra3O35118 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.05■□□□□ 0.32
Gfra3O35118 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gfra3O35118 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.05■□□□□ 0.32
Gfra3O35118 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gfra3O35118 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gfra3O35118 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gfra3O35118 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms