Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ebf3O08791 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf3O08791 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf3O08791 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf3O08791 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.55■□□□□ 0.88
Ebf3O08791 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.55■□□□□ 0.88
Ebf3O08791 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf3O08791 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf3O08791 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf3O08791 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf3O08791 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ebf3O08791 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.54■□□□□ 0.88
Ebf3O08791 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.54■□□□□ 0.88
Ebf3O08791 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ebf3O08791 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ebf3O08791 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.54■□□□□ 0.88
Ebf3O08791 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.54■□□□□ 0.88
Ebf3O08791 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ebf3O08791 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ebf3O08791 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ebf3O08791 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ebf3O08791 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Ebf3O08791 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.54■□□□□ 0.88
Ebf3O08791 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ebf3O08791 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.53■□□□□ 0.88
Ebf3O08791 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.53■□□□□ 0.88
Ebf3O08791 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Ebf3O08791 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ebf3O08791 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ebf3O08791 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ebf3O08791 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ebf3O08791 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.52■□□□□ 0.88
Ebf3O08791 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.52■□□□□ 0.88
Ebf3O08791 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ebf3O08791 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.52■□□□□ 0.88
Ebf3O08791 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ebf3O08791 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.52■□□□□ 0.88
Ebf3O08791 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.52■□□□□ 0.88
Ebf3O08791 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ebf3O08791 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ebf3O08791 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.51■□□□□ 0.87
Ebf3O08791 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.51■□□□□ 0.87
Ebf3O08791 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ebf3O08791 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Ebf3O08791 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ebf3O08791 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ebf3O08791 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.5■□□□□ 0.87
Ebf3O08791 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ebf3O08791 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ebf3O08791 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ebf3O08791 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ebf3O08791 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.5■□□□□ 0.87
Ebf3O08791 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ebf3O08791 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ebf3O08791 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ebf3O08791 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ebf3O08791 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf3O08791 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf3O08791 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf3O08791 Gm10849-201ENSMUST00000100397 618 ntBASIC20.49■□□□□ 0.87
Ebf3O08791 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf3O08791 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf3O08791 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.49■□□□□ 0.87
Ebf3O08791 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.49■□□□□ 0.87
Ebf3O08791 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf3O08791 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf3O08791 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf3O08791 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ebf3O08791 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ebf3O08791 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ebf3O08791 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ebf3O08791 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ebf3O08791 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ebf3O08791 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ebf3O08791 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Ebf3O08791 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ebf3O08791 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Ebf3O08791 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ebf3O08791 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.47■□□□□ 0.87
Ebf3O08791 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ebf3O08791 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms