Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Gm9812-201ENSMUST00000061934 968 ntBASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim55G3X8Y1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim55G3X8Y1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim55G3X8Y1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trim55G3X8Y1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim55G3X8Y1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim55G3X8Y1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim55G3X8Y1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim55G3X8Y1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim55G3X8Y1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim55G3X8Y1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim55G3X8Y1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Trim55G3X8Y1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
Trim55G3X8Y1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim55G3X8Y1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim55G3X8Y1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Trim55G3X8Y1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim55G3X8Y1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim55G3X8Y1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim55G3X8Y1 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.23■□□□□ 0.83
Trim55G3X8Y1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim55G3X8Y1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Trim55G3X8Y1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.23■□□□□ 0.83
Trim55G3X8Y1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.23■□□□□ 0.83
Trim55G3X8Y1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.23■□□□□ 0.83
Trim55G3X8Y1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim55G3X8Y1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Trim55G3X8Y1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim55G3X8Y1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim55G3X8Y1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim55G3X8Y1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trim55G3X8Y1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim55G3X8Y1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim55G3X8Y1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim55G3X8Y1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim55G3X8Y1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim55G3X8Y1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trim55G3X8Y1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim55G3X8Y1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim55G3X8Y1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim55G3X8Y1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trim55G3X8Y1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim55G3X8Y1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim55G3X8Y1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim55G3X8Y1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim55G3X8Y1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim55G3X8Y1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Trim55G3X8Y1 Terc-201ENSMUST00000082862 423 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms