Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm12441-201ENSMUST00000121806 588 ntBASIC17.79■□□□□ 0.44
Dchs1E9PVD3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dchs1E9PVD3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dchs1E9PVD3 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.79■□□□□ 0.44
Dchs1E9PVD3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dchs1E9PVD3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.78■□□□□ 0.44
Dchs1E9PVD3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Dchs1E9PVD3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Dchs1E9PVD3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.77■□□□□ 0.44
Dchs1E9PVD3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Dchs1E9PVD3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Dchs1E9PVD3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Dchs1E9PVD3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dchs1E9PVD3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dchs1E9PVD3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dchs1E9PVD3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Dchs1E9PVD3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Dchs1E9PVD3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dchs1E9PVD3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Dchs1E9PVD3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dchs1E9PVD3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dchs1E9PVD3 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.76■□□□□ 0.43
Dchs1E9PVD3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Dchs1E9PVD3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dchs1E9PVD3 Mir5133-201ENSMUST00000174955 77 ntBASIC17.75■□□□□ 0.43
Dchs1E9PVD3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dchs1E9PVD3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dchs1E9PVD3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.75■□□□□ 0.43
Dchs1E9PVD3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dchs1E9PVD3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dchs1E9PVD3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dchs1E9PVD3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dchs1E9PVD3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dchs1E9PVD3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dchs1E9PVD3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dchs1E9PVD3 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.74■□□□□ 0.43
Dchs1E9PVD3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dchs1E9PVD3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Dchs1E9PVD3 Gm13234-201ENSMUST00000120010 747 ntBASIC17.74■□□□□ 0.43
Dchs1E9PVD3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dchs1E9PVD3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Dchs1E9PVD3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Dchs1E9PVD3 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Dchs1E9PVD3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Gm13168-201ENSMUST00000121771 632 ntBASIC17.71■□□□□ 0.43
Dchs1E9PVD3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Dchs1E9PVD3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms