Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm12887B1AVM1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm12887B1AVM1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.02■□□□□ 0.16
Gm12887B1AVM1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm12887B1AVM1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.02■□□□□ 0.16
Gm12887B1AVM1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm12887B1AVM1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm12887B1AVM1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm12887B1AVM1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm12887B1AVM1 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.01■□□□□ 0.15
Gm12887B1AVM1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm12887B1AVM1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm12887B1AVM1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm12887B1AVM1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm12887B1AVM1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm12887B1AVM1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm12887B1AVM1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.01■□□□□ 0.15
Gm12887B1AVM1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.01■□□□□ 0.15
Gm12887B1AVM1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm12887B1AVM1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm12887B1AVM1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm12887B1AVM1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm12887B1AVM1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm12887B1AVM1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm12887B1AVM1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16■□□□□ 0.15
Gm12887B1AVM1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16■□□□□ 0.15
Gm12887B1AVM1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Gm12887B1AVM1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm12887B1AVM1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm12887B1AVM1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Gm12887B1AVM1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm12887B1AVM1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Gm27502-201ENSMUST00000183495 199 ntBASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Gm12887B1AVM1 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Gm12887B1AVM1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm12887B1AVM1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Gm12887B1AVM1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Gm12887B1AVM1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm12887B1AVM1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Gm12887B1AVM1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm12887B1AVM1 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.96■□□□□ 0.15
Gm12887B1AVM1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Gm12887B1AVM1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms