Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.65■■□□□ 1.86
CLRN2A0PK11 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CLRN2A0PK11 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLRN2A0PK11 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLRN2A0PK11 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLRN2A0PK11 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CLRN2A0PK11 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLRN2A0PK11 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CLRN2A0PK11 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLRN2A0PK11 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CLRN2A0PK11 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.64■■□□□ 1.86
CLRN2A0PK11 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
CLRN2A0PK11 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CLRN2A0PK11 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.64■■□□□ 1.86
CLRN2A0PK11 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CLRN2A0PK11 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
CLRN2A0PK11 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
CLRN2A0PK11 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.64■■□□□ 1.86
CLRN2A0PK11 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.64■■□□□ 1.86
CLRN2A0PK11 AC105233.4-201ENST00000642045 216 ntBASIC26.64■■□□□ 1.86
CLRN2A0PK11 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.64■■□□□ 1.85
CLRN2A0PK11 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLRN2A0PK11 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLRN2A0PK11 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CLRN2A0PK11 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.63■■□□□ 1.85
CLRN2A0PK11 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLRN2A0PK11 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLRN2A0PK11 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLRN2A0PK11 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.63■■□□□ 1.85
CLRN2A0PK11 ID1-201ENST00000376105 1233 ntBASIC26.63■■□□□ 1.85
CLRN2A0PK11 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.63■■□□□ 1.85
CLRN2A0PK11 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CLRN2A0PK11 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.63■■□□□ 1.85
CLRN2A0PK11 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.63■■□□□ 1.85
CLRN2A0PK11 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CLRN2A0PK11 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.63■■□□□ 1.85
CLRN2A0PK11 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLRN2A0PK11 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CLRN2A0PK11 AP005435.1-201ENST00000529293 1178 ntBASIC26.62■■□□□ 1.85
CLRN2A0PK11 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLRN2A0PK11 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
CLRN2A0PK11 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.62■■□□□ 1.85
CLRN2A0PK11 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLRN2A0PK11 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLRN2A0PK11 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CLRN2A0PK11 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.62■■□□□ 1.85
CLRN2A0PK11 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.61■■□□□ 1.85
CLRN2A0PK11 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.61■■□□□ 1.85
CLRN2A0PK11 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC26.61■■□□□ 1.85
CLRN2A0PK11 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.61■■□□□ 1.85
CLRN2A0PK11 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CLRN2A0PK11 LINC01529-204ENST00000636474 1715 ntBASIC26.61■■□□□ 1.85
CLRN2A0PK11 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.61■■□□□ 1.85
CLRN2A0PK11 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLRN2A0PK11 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.61■■□□□ 1.85
CLRN2A0PK11 AC144652.1-201ENST00000609974 1624 ntBASIC26.61■■□□□ 1.85
CLRN2A0PK11 AC138932.3-201ENST00000567634 1902 ntBASIC26.61■■□□□ 1.85
CLRN2A0PK11 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CLRN2A0PK11 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.6■■□□□ 1.85
CLRN2A0PK11 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.6■■□□□ 1.85
CLRN2A0PK11 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CLRN2A0PK11 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLRN2A0PK11 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.6■■□□□ 1.85
CLRN2A0PK11 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CLRN2A0PK11 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CLRN2A0PK11 KRT18P61-201ENST00000585825 1298 ntBASIC26.59■■□□□ 1.85
CLRN2A0PK11 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.59■■□□□ 1.85
CLRN2A0PK11 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.59■■□□□ 1.85
CLRN2A0PK11 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CLRN2A0PK11 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLRN2A0PK11 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLRN2A0PK11 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLRN2A0PK11 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.58■■□□□ 1.85
CLRN2A0PK11 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.58■■□□□ 1.85
CLRN2A0PK11 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CLRN2A0PK11 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.58■■□□□ 1.85
CLRN2A0PK11 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLRN2A0PK11 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.57■■□□□ 1.84
CLRN2A0PK11 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.57■■□□□ 1.84
CLRN2A0PK11 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLRN2A0PK11 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLRN2A0PK11 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLRN2A0PK11 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.57■■□□□ 1.84
CLRN2A0PK11 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.57■■□□□ 1.84
CLRN2A0PK11 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.57■■□□□ 1.84
CLRN2A0PK11 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CLRN2A0PK11 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLRN2A0PK11 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CLRN2A0PK11 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLRN2A0PK11 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CLRN2A0PK11 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLRN2A0PK11 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLRN2A0PK11 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CLRN2A0PK11 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
CLRN2A0PK11 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.56■■□□□ 1.84
CLRN2A0PK11 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CLRN2A0PK11 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.56■■□□□ 1.84
CLRN2A0PK11 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CLRN2A0PK11 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CLRN2A0PK11 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms