Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3854A0A1B0GSS6 Gm13234-201ENSMUST00000120010 747 ntBASIC19.92■□□□□ 0.78
Gm3854A0A1B0GSS6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Gm3854A0A1B0GSS6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3854A0A1B0GSS6 Gm27011-201ENSMUST00000182352 972 ntBASIC19.92■□□□□ 0.78
Gm3854A0A1B0GSS6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.92■□□□□ 0.78
Gm3854A0A1B0GSS6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.92■□□□□ 0.78
Gm3854A0A1B0GSS6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.92■□□□□ 0.78
Gm3854A0A1B0GSS6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3854A0A1B0GSS6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3854A0A1B0GSS6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3854A0A1B0GSS6 Gm27801-201ENSMUST00000184174 223 ntBASIC19.9■□□□□ 0.78
Gm3854A0A1B0GSS6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3854A0A1B0GSS6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.9■□□□□ 0.78
Gm3854A0A1B0GSS6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3854A0A1B0GSS6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3854A0A1B0GSS6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3854A0A1B0GSS6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Gm3854A0A1B0GSS6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Gm3854A0A1B0GSS6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3854A0A1B0GSS6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3854A0A1B0GSS6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3854A0A1B0GSS6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3854A0A1B0GSS6 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.89■□□□□ 0.77
Gm3854A0A1B0GSS6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3854A0A1B0GSS6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3854A0A1B0GSS6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3854A0A1B0GSS6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3854A0A1B0GSS6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3854A0A1B0GSS6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3854A0A1B0GSS6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3854A0A1B0GSS6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3854A0A1B0GSS6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3854A0A1B0GSS6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3854A0A1B0GSS6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.85■□□□□ 0.77
Gm3854A0A1B0GSS6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3854A0A1B0GSS6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms