Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cfap99A0A140LIX9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cfap99A0A140LIX9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cfap99A0A140LIX9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.67■■□□□ 1.38
Cfap99A0A140LIX9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cfap99A0A140LIX9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.67■■□□□ 1.38
Cfap99A0A140LIX9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Cfap99A0A140LIX9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cfap99A0A140LIX9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cfap99A0A140LIX9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cfap99A0A140LIX9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
Cfap99A0A140LIX9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cfap99A0A140LIX9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cfap99A0A140LIX9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.65■■□□□ 1.38
Cfap99A0A140LIX9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
Cfap99A0A140LIX9 Gm42569-201ENSMUST00000200539 472 ntBASIC23.65■■□□□ 1.38
Cfap99A0A140LIX9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cfap99A0A140LIX9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cfap99A0A140LIX9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cfap99A0A140LIX9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cfap99A0A140LIX9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cfap99A0A140LIX9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cfap99A0A140LIX9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cfap99A0A140LIX9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.64■■□□□ 1.37
Cfap99A0A140LIX9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cfap99A0A140LIX9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cfap99A0A140LIX9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Gm27405-201ENSMUST00000184201 112 ntBASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cfap99A0A140LIX9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Gm42642-201ENSMUST00000200683 355 ntBASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Cfap99A0A140LIX9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cfap99A0A140LIX9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Gm26571-201ENSMUST00000181399 666 ntBASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cfap99A0A140LIX9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cfap99A0A140LIX9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms