Protein–RNA interactions for Protein: A0A0N4SUM8

Gm45140, Predicted gene 45140, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm45140A0A0N4SUM8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm45140A0A0N4SUM8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Gm45140A0A0N4SUM8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm45140A0A0N4SUM8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm45140A0A0N4SUM8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Gm45140A0A0N4SUM8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm45140A0A0N4SUM8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm45140A0A0N4SUM8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm45140A0A0N4SUM8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm45140A0A0N4SUM8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm45140A0A0N4SUM8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.35■■□□□ 1.01
Gm45140A0A0N4SUM8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Gm45140A0A0N4SUM8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm45140A0A0N4SUM8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm45140A0A0N4SUM8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm45140A0A0N4SUM8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm45140A0A0N4SUM8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm45140A0A0N4SUM8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm45140A0A0N4SUM8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm45140A0A0N4SUM8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Gm45140A0A0N4SUM8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm45140A0A0N4SUM8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm45140A0A0N4SUM8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm45140A0A0N4SUM8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm45140A0A0N4SUM8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm45140A0A0N4SUM8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Gm45140A0A0N4SUM8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm45140A0A0N4SUM8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm45140A0A0N4SUM8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Gm45140A0A0N4SUM8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm45140A0A0N4SUM8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Gm45140A0A0N4SUM8 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.31■■□□□ 1
Gm45140A0A0N4SUM8 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.31■■□□□ 1
Gm45140A0A0N4SUM8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm45140A0A0N4SUM8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.3■■□□□ 1
Gm45140A0A0N4SUM8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm45140A0A0N4SUM8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm45140A0A0N4SUM8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.3■■□□□ 1
Gm45140A0A0N4SUM8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Gm45140A0A0N4SUM8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm45140A0A0N4SUM8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm45140A0A0N4SUM8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm45140A0A0N4SUM8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Mir3960-201ENSMUST00000198213 73 ntBASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm45140A0A0N4SUM8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm45140A0A0N4SUM8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm45140A0A0N4SUM8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Gm45140A0A0N4SUM8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm45140A0A0N4SUM8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.28■■□□□ 1
Gm45140A0A0N4SUM8 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.28■■□□□ 1
Gm45140A0A0N4SUM8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm45140A0A0N4SUM8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm45140A0A0N4SUM8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm45140A0A0N4SUM8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm45140A0A0N4SUM8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm45140A0A0N4SUM8 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.27■■□□□ 1
Gm45140A0A0N4SUM8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm45140A0A0N4SUM8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm45140A0A0N4SUM8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm45140A0A0N4SUM8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm45140A0A0N4SUM8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm45140A0A0N4SUM8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm45140A0A0N4SUM8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Gm45140A0A0N4SUM8 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.26■□□□□ 0.99
Gm45140A0A0N4SUM8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm45140A0A0N4SUM8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm45140A0A0N4SUM8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm45140A0A0N4SUM8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Gm45140A0A0N4SUM8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm45140A0A0N4SUM8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm45140A0A0N4SUM8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm45140A0A0N4SUM8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.25■□□□□ 0.99
Gm45140A0A0N4SUM8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm45140A0A0N4SUM8 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.25■□□□□ 0.99
Gm45140A0A0N4SUM8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm45140A0A0N4SUM8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Gm45140A0A0N4SUM8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm45140A0A0N4SUM8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms