Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv29A0A0G2LB96 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv29A0A0G2LB96 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv29A0A0G2LB96 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv29A0A0G2LB96 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv29A0A0G2LB96 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv29A0A0G2LB96 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv29A0A0G2LB96 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv29A0A0G2LB96 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv29A0A0G2LB96 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv29A0A0G2LB96 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv29A0A0G2LB96 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv29A0A0G2LB96 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv29A0A0G2LB96 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv29A0A0G2LB96 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv29A0A0G2LB96 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv29A0A0G2LB96 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv29A0A0G2LB96 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv29A0A0G2LB96 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Mir6236-201ENSMUST00000184437 123 ntBASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv29A0A0G2LB96 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trbv29A0A0G2LB96 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv29A0A0G2LB96 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv29A0A0G2LB96 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv29A0A0G2LB96 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv29A0A0G2LB96 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv29A0A0G2LB96 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv29A0A0G2LB96 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Gm40881-201ENSMUST00000223397 166 ntBASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv29A0A0G2LB96 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Trbv29A0A0G2LB96 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trbv29A0A0G2LB96 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trbv29A0A0G2LB96 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv29A0A0G2LB96 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv29A0A0G2LB96 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms