Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-2A0A0G2JF93 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 AC167019.3-201ENSMUST00000228225 1266 ntBASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-2A0A0G2JF93 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Golph3-205ENSMUST00000228671 2842 ntBASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-2A0A0G2JF93 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13n-2A0A0G2JF93 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13n-2A0A0G2JF93 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13n-2A0A0G2JF93 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-2A0A0G2JF93 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-2A0A0G2JF93 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms