Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13n-1A0A0G2JEU8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gm8493-201ENSMUST00000196881 489 ntBASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gm6139-201ENSMUST00000079261 882 ntBASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Gm43017-201ENSMUST00000198296 752 ntBASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-1A0A0G2JEU8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.21□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms