Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.73■□□□□ 0.43
Trbv20A0A0B4J1H5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv20A0A0B4J1H5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Gm14523-201ENSMUST00000117260 558 ntBASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Gm27502-201ENSMUST00000183495 199 ntBASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv20A0A0B4J1H5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Trbv20A0A0B4J1H5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv20A0A0B4J1H5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv20A0A0B4J1H5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv20A0A0B4J1H5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trbv20A0A0B4J1H5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv20A0A0B4J1H5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trbv20A0A0B4J1H5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trbv20A0A0B4J1H5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv20A0A0B4J1H5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trbv20A0A0B4J1H5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv20A0A0B4J1H5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trbv20A0A0B4J1H5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.68■□□□□ 0.42
Trbv20A0A0B4J1H5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv20A0A0B4J1H5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv20A0A0B4J1H5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv20A0A0B4J1H5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trbv20A0A0B4J1H5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv20A0A0B4J1H5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv20A0A0B4J1H5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv20A0A0B4J1H5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv20A0A0B4J1H5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv20A0A0B4J1H5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv20A0A0B4J1H5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms