Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.35■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-43A0A0A6YXN5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.35■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.35■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv1-43A0A0A6YXN5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.31■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Gm42642-201ENSMUST00000200683 355 ntBASIC18.3■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-43A0A0A6YXN5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms