Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.09■□□□□ 0.01
Trdv1A0A075B657 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdv1A0A075B657 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdv1A0A075B657 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdv1A0A075B657 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdv1A0A075B657 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trdv1A0A075B657 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv1A0A075B657 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.08■□□□□ 0
Trdv1A0A075B657 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv1A0A075B657 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv1A0A075B657 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv1A0A075B657 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trdv1A0A075B657 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.07■□□□□ 0
Trdv1A0A075B657 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.07■□□□□ 0
Trdv1A0A075B657 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trdv1A0A075B657 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trdv1A0A075B657 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trdv1A0A075B657 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Trdv1A0A075B657 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.06■□□□□ 0
Trdv1A0A075B657 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv1A0A075B657 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv1A0A075B657 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trdv1A0A075B657 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdv1A0A075B657 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdv1A0A075B657 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trdv1A0A075B657 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdv1A0A075B657 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trdv1A0A075B657 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trdv1A0A075B657 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.06■□□□□ 0
Trdv1A0A075B657 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdv1A0A075B657 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trdv1A0A075B657 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv1A0A075B657 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv1A0A075B657 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdv1A0A075B657 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trdv1A0A075B657 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trdv1A0A075B657 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trdv1A0A075B657 Gm7143-201ENSMUST00000222811 859 ntBASIC15.05■□□□□ -0
Trdv1A0A075B657 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.05■□□□□ -0
Trdv1A0A075B657 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.05■□□□□ -0
Trdv1A0A075B657 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv1A0A075B657 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trdv1A0A075B657 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv1A0A075B657 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv1A0A075B657 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv1A0A075B657 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.04■□□□□ -0
Trdv1A0A075B657 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trdv1A0A075B657 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.04■□□□□ -0
Trdv1A0A075B657 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv1A0A075B657 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv1A0A075B657 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv1A0A075B657 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv1A0A075B657 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv1A0A075B657 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv1A0A075B657 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv1A0A075B657 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.03■□□□□ -0
Trdv1A0A075B657 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.03■□□□□ -0
Trdv1A0A075B657 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.03■□□□□ -0
Trdv1A0A075B657 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.03■□□□□ -0
Trdv1A0A075B657 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trdv1A0A075B657 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv1A0A075B657 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trdv1A0A075B657 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trdv1A0A075B657 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.02■□□□□ -0
Trdv1A0A075B657 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trdv1A0A075B657 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Trdv1A0A075B657 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms