Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13d-1A0A075B606 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-1A0A075B606 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-1A0A075B606 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-1A0A075B606 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13d-1A0A075B606 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-1A0A075B606 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav13d-1A0A075B606 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav13d-1A0A075B606 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-1A0A075B606 Gm43017-201ENSMUST00000198296 752 ntBASIC14.45□□□□□ -0.1
Trav13d-1A0A075B606 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-1A0A075B606 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav13d-1A0A075B606 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-1A0A075B606 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-1A0A075B606 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-1A0A075B606 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-1A0A075B606 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav13d-1A0A075B606 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-1A0A075B606 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-1A0A075B606 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-1A0A075B606 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-1A0A075B606 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-1A0A075B606 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-1A0A075B606 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-1A0A075B606 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms