Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav9-1A0A075B601 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9-1A0A075B601 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9-1A0A075B601 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Gm5812-201ENSMUST00000061073 957 ntBASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9-1A0A075B601 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav9-1A0A075B601 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Gm7417-201ENSMUST00000192950 473 ntBASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9-1A0A075B601 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Gm15546-201ENSMUST00000122095 826 ntBASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Trav9-1A0A075B601 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9-1A0A075B601 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms