Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 AC160340.2-201ENSMUST00000220812 3675 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Gm3550W4VSN7 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gm15604-201ENSMUST00000118350 1456 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm3550W4VSN7 AC121574.1-201ENSMUST00000228770 3132 ntBASIC8.83□□□□□ -1
Gm3550W4VSN7 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm44798-201ENSMUST00000208123 2410 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Ighv13-1-201ENSMUST00000103480 294 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm25053-201ENSMUST00000103982 133 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm25922-201ENSMUST00000104281 130 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm12179-201ENSMUST00000118344 1272 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm12176-201ENSMUST00000121420 875 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm11980-201ENSMUST00000121445 986 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm14165-201ENSMUST00000121456 952 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Mir1901-201ENSMUST00000122616 78 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm24679-201ENSMUST00000158762 111 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm9358-201ENSMUST00000183067 927 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm25053-202ENSMUST00000199731 132 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm44740-201ENSMUST00000205603 1614 ntBASIC8.82□□□□□ -1
Gm3550W4VSN7 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm3550W4VSN7 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm3550W4VSN7 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC8.81□□□□□ -1
Gm3550W4VSN7 Gm37003-201ENSMUST00000194702 2827 ntBASIC8.81□□□□□ -1
Gm3550W4VSN7 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm3550W4VSN7 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms