Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Snord17-201ENSMUST00000104526 238 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm12496-201ENSMUST00000154377 668 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm8810-201ENSMUST00000172895 754 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm26607-201ENSMUST00000180661 867 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm8463-201ENSMUST00000208573 613 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm19208-201ENSMUST00000213861 912 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 CT571245.2-201ENSMUST00000218421 305 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm7594-201ENSMUST00000218595 871 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm18624-201ENSMUST00000220966 658 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Arhgef33-209ENSMUST00000225223 714 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 AC140299.1-201ENSMUST00000217855 1510 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Samd15-202ENSMUST00000182869 2031 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Syncrip-211ENSMUST00000174688 3176 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Zmiz2-202ENSMUST00000102914 3806 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm26601-201ENSMUST00000181427 3551 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 CT009518.1-201ENSMUST00000224886 1571 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm44080-201ENSMUST00000204451 2214 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm26700-201ENSMUST00000181480 1957 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Wdcp-206ENSMUST00000223551 4317 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Ptpn20-201ENSMUST00000022508 3153 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Eif2d-201ENSMUST00000068791 3316 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm7435-202ENSMUST00000216003 2424 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Nek6-201ENSMUST00000054234 10338 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm37077-201ENSMUST00000195723 3691 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Mir692-1-201ENSMUST00000102263 109 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm15004-201ENSMUST00000119192 630 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm8738-201ENSMUST00000172606 329 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm20495-201ENSMUST00000173902 235 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm44855-201ENSMUST00000205725 362 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 AC129323.1-201ENSMUST00000216733 470 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 4930525C09Rik-201ENSMUST00000217919 677 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm6991-201ENSMUST00000218475 1178 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 AC022775.2-201ENSMUST00000227885 646 ntBASIC8.51□□□□□ -1.05
Trim63Q38HM4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim63Q38HM4 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 243.7 ms