Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ddx6P54823 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ddx6P54823 Gm7672-201ENSMUST00000180915 872 ntBASIC10.65□□□□□ -0.7
Ddx6P54823 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC10.65□□□□□ -0.7
Ddx6P54823 Gm38233-201ENSMUST00000194259 807 ntBASIC10.65□□□□□ -0.7
Ddx6P54823 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ddx6P54823 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ddx6P54823 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC10.65□□□□□ -0.7
Ddx6P54823 AC124356.1-201ENSMUST00000221469 698 ntBASIC10.65□□□□□ -0.7
Ddx6P54823 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.65□□□□□ -0.7
Ddx6P54823 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ddx6P54823 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ddx6P54823 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Ddx6P54823 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ddx6P54823 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC10.65□□□□□ -0.7
Ddx6P54823 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ddx6P54823 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ddx6P54823 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ddx6P54823 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ddx6P54823 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ddx6P54823 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Ddx6P54823 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ddx6P54823 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ddx6P54823 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ddx6P54823 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ddx6P54823 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ddx6P54823 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Ddx6P54823 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.64□□□□□ -0.71
Ddx6P54823 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.64□□□□□ -0.71
Ddx6P54823 Gm4462-201ENSMUST00000166453 492 ntBASIC10.64□□□□□ -0.71
Ddx6P54823 Gm23521-201ENSMUST00000177845 110 ntBASIC10.64□□□□□ -0.71
Ddx6P54823 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC10.64□□□□□ -0.71
Ddx6P54823 Gm29487-201ENSMUST00000190146 256 ntBASIC10.64□□□□□ -0.71
Ddx6P54823 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC10.64□□□□□ -0.71
Ddx6P54823 Gm37444-201ENSMUST00000193605 439 ntBASIC10.64□□□□□ -0.71
Ddx6P54823 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 AC156274.1-201ENSMUST00000219193 634 ntBASIC10.64□□□□□ -0.71
Ddx6P54823 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.64□□□□□ -0.71
Ddx6P54823 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 AC242269.1-201ENSMUST00000227020 741 ntBASIC10.64□□□□□ -0.71
Ddx6P54823 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.64□□□□□ -0.71
Ddx6P54823 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.64□□□□□ -0.71
Ddx6P54823 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ddx6P54823 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm4880-201ENSMUST00000207645 1696 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Ddx6P54823 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm45728-201ENSMUST00000211475 2979 ntBASIC10.63□□□□□ -0.71
Ddx6P54823 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ddx6P54823 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Ddx6P54823 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms