Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chd1P40201 Gm10463-202ENSMUST00000195772 2889 ntBASIC15.31■□□□□ 0.04
Chd1P40201 Ighv1-7-201ENSMUST00000103496 388 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chd1P40201 Gm13592-201ENSMUST00000118148 1010 ntBASIC15.31■□□□□ 0.04
Chd1P40201 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC15.31■□□□□ 0.04
Chd1P40201 Pdlim5-209ENSMUST00000196908 1196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Zim2-202ENSMUST00000203572 1158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Chd1P40201 Gm44889-201ENSMUST00000207674 1019 ntTSL 5 BASIC15.31■□□□□ 0.04
Chd1P40201 4933400L20Rik-202ENSMUST00000211119 870 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 4933402D24Rik-201ENSMUST00000027102 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chd1P40201 4933427I22Rik-202ENSMUST00000153921 1378 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.3■□□□□ 0.04
Chd1P40201 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Gm12353-201ENSMUST00000108250 554 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Chd1P40201 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Gm12445-201ENSMUST00000117947 885 ntBASIC15.3■□□□□ 0.04
Chd1P40201 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC15.3■□□□□ 0.04
Chd1P40201 Gm12364-201ENSMUST00000144419 547 ntTSL 3 BASIC15.3■□□□□ 0.04
Chd1P40201 Gm28865-201ENSMUST00000187685 723 ntTSL 3 BASIC15.3■□□□□ 0.04
Chd1P40201 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC15.3■□□□□ 0.04
Chd1P40201 CT009721.1-201ENSMUST00000213590 770 ntTSL 5 BASIC15.3■□□□□ 0.04
Chd1P40201 AC125488.2-201ENSMUST00000218908 793 ntBASIC15.3■□□□□ 0.04
Chd1P40201 AC124687.4-201ENSMUST00000222361 463 ntTSL 5 BASIC15.3■□□□□ 0.04
Chd1P40201 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Chd1P40201 Gm10291-201ENSMUST00000094175 999 ntBASIC15.3■□□□□ 0.04
Chd1P40201 Gm16559-201ENSMUST00000160080 1564 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Gskip-201ENSMUST00000051934 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.3■□□□□ 0.04
Chd1P40201 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC15.3■□□□□ 0.04
Chd1P40201 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC15.3■□□□□ 0.04
Chd1P40201 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1P40201 Gm43499-201ENSMUST00000202091 2107 ntBASIC15.3■□□□□ 0.04
Chd1P40201 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Chd1P40201 Gm36987-201ENSMUST00000194704 2979 ntBASIC15.29■□□□□ 0.04
Chd1P40201 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Gm25095-201ENSMUST00000104047 131 ntBASIC15.29■□□□□ 0.04
Chd1P40201 Gm11621-201ENSMUST00000118253 589 ntBASIC15.29■□□□□ 0.04
Chd1P40201 Gm12035-201ENSMUST00000121890 623 ntBASIC15.29■□□□□ 0.04
Chd1P40201 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC15.29■□□□□ 0.04
Chd1P40201 Mir7011-201ENSMUST00000183768 73 ntBASIC15.29■□□□□ 0.04
Chd1P40201 AC164092.2-201ENSMUST00000214808 753 ntTSL 3 BASIC15.29■□□□□ 0.04
Chd1P40201 Gm6989-201ENSMUST00000218409 654 ntBASIC15.29■□□□□ 0.04
Chd1P40201 AC107711.1-201ENSMUST00000227258 1295 ntBASIC15.29■□□□□ 0.04
Chd1P40201 Rpl32-201ENSMUST00000081840 517 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd1P40201 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Agmo-204ENSMUST00000160390 2194 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chd1P40201 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd1P40201 Ccl3-201ENSMUST00000001008 766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Tpt1-ps5-201ENSMUST00000112150 516 ntBASIC15.29■□□□□ 0.04
Chd1P40201 Rhox1-201ENSMUST00000115210 883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Zscan30-201ENSMUST00000115829 484 ntTSL 2 BASIC15.29■□□□□ 0.04
Chd1P40201 Gm15104-201ENSMUST00000132626 842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Gm12996-201ENSMUST00000151670 636 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC15.29■□□□□ 0.04
Chd1P40201 Gm38390-201ENSMUST00000194859 1065 ntBASIC15.29■□□□□ 0.04
Chd1P40201 Gm18745-201ENSMUST00000216018 548 ntBASIC15.29■□□□□ 0.04
Chd1P40201 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Mrpl55-201ENSMUST00000045697 940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd1P40201 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd1P40201 Gdpd1-201ENSMUST00000020804 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Gm16287-201ENSMUST00000097827 2324 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1P40201 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1P40201 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1P40201 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1P40201 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1P40201 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC15.28■□□□□ 0.04
Chd1P40201 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms