Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
ClgnP52194 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm13140-201ENSMUST00000119840 3151 ntBASIC10.73□□□□□ -0.69
ClgnP52194 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
ClgnP52194 Gm6158-201ENSMUST00000109467 904 ntBASIC10.73□□□□□ -0.69
ClgnP52194 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.73□□□□□ -0.69
ClgnP52194 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.73□□□□□ -0.69
ClgnP52194 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.73□□□□□ -0.69
ClgnP52194 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.73□□□□□ -0.69
ClgnP52194 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.73□□□□□ -0.69
ClgnP52194 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.73□□□□□ -0.69
ClgnP52194 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.73□□□□□ -0.69
ClgnP52194 Gm24514-201ENSMUST00000174961 285 ntBASIC10.73□□□□□ -0.69
ClgnP52194 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Mir6998-201ENSMUST00000183343 64 ntBASIC10.73□□□□□ -0.69
ClgnP52194 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm43097-201ENSMUST00000196867 151 ntBASIC10.73□□□□□ -0.69
ClgnP52194 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.73□□□□□ -0.69
ClgnP52194 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.73□□□□□ -0.69
ClgnP52194 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.73□□□□□ -0.69
ClgnP52194 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.73□□□□□ -0.69
ClgnP52194 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ClgnP52194 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
ClgnP52194 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
ClgnP52194 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
ClgnP52194 Gm25562-201ENSMUST00000104608 133 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Gm25063-201ENSMUST00000104666 94 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.72□□□□□ -0.69
ClgnP52194 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.72□□□□□ -0.69
ClgnP52194 Gm20392-201ENSMUST00000173047 701 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Mir8091-201ENSMUST00000183602 139 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Gm32111-201ENSMUST00000207689 846 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
ClgnP52194 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
ClgnP52194 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.72□□□□□ -0.69
ClgnP52194 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
ClgnP52194 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.72□□□□□ -0.69
ClgnP52194 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.72□□□□□ -0.69
ClgnP52194 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
ClgnP52194 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ClgnP52194 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.71□□□□□ -0.69
ClgnP52194 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms