Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm18123-201ENSMUST00000210874 822 ntBASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Gm18122-201ENSMUST00000211390 904 ntBASIC10.8□□□□□ -0.68
Trub1Q8C0D0 AC149294.3-201ENSMUST00000226888 732 ntBASIC10.8□□□□□ -0.68
Trub1Q8C0D0 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Cdh18-207ENSMUST00000226693 2165 ntBASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm15136-201ENSMUST00000120552 533 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm13981-201ENSMUST00000122360 447 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm27438-201ENSMUST00000183480 110 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm29155-201ENSMUST00000185910 269 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm28671-201ENSMUST00000187036 692 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm3712-201ENSMUST00000118523 2071 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gm45867-201ENSMUST00000208201 2317 ntBASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trub1Q8C0D0 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm26670-201ENSMUST00000180429 3287 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm12795-201ENSMUST00000117594 539 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm6500-201ENSMUST00000119412 451 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm13857-201ENSMUST00000139645 173 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Mir8111-201ENSMUST00000184463 137 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm45363-201ENSMUST00000210196 1294 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms