Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Cdrt4os1-202ENSMUST00000153180 1109 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 6330549D23Rik-202ENSMUST00000159536 1102 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm7678-201ENSMUST00000181879 943 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm5037-201ENSMUST00000205327 618 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm44721-201ENSMUST00000206978 472 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 AC167234.1-201ENSMUST00000219929 279 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm46344-201ENSMUST00000220530 887 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm14182-201ENSMUST00000119334 210 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm11662-201ENSMUST00000121389 1193 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm3654-201ENSMUST00000173038 909 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 1810007D17Rik-201ENSMUST00000187629 742 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Gm6960-201ENSMUST00000051629 639 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Ly6g5b-201ENSMUST00000062657 1046 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Spg11Q3UHA3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Spg11Q3UHA3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Spg11Q3UHA3 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Spg11Q3UHA3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.65□□□□□ -0.87
Spg11Q3UHA3 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Spg11Q3UHA3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Spg11Q3UHA3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Spg11Q3UHA3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Spg11Q3UHA3 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.65□□□□□ -0.87
Spg11Q3UHA3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm8818-201ENSMUST00000110797 1047 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm26407-201ENSMUST00000158504 307 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm20508-201ENSMUST00000172480 487 ntTSL 2 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Kcne3-204ENSMUST00000179842 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm27395-201ENSMUST00000183938 460 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Mir7058-201ENSMUST00000184637 75 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Ly6c1-205ENSMUST00000187347 522 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm23786-202ENSMUST00000200181 119 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Rnf212b-201ENSMUST00000218311 1201 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 AC113178.1-201ENSMUST00000227616 935 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm38111-201ENSMUST00000194817 2741 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm8848-201ENSMUST00000197270 1343 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm13413-201ENSMUST00000120953 602 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm22762-201ENSMUST00000157395 137 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm8955-201ENSMUST00000182945 1008 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm17813-201ENSMUST00000185377 328 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Spin3-ps-201ENSMUST00000192825 770 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Gm38328-201ENSMUST00000195582 317 ntBASIC9.64□□□□□ -0.87
Spg11Q3UHA3 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms