Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm37036-201ENSMUST00000192836 2506 ntBASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Gm43225-201ENSMUST00000201381 1439 ntBASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Rhox1-201ENSMUST00000115210 883 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Gm16304-201ENSMUST00000129972 775 ntBASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Gm16350-201ENSMUST00000162958 446 ntTSL 2 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Rpl6l-201ENSMUST00000171120 871 ntBASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Gm8388-201ENSMUST00000193000 756 ntBASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Pdlim5-209ENSMUST00000196908 1196 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Gm35665-201ENSMUST00000206742 1140 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 AC159244.2-201ENSMUST00000222051 220 ntTSL 3 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Gm43625-201ENSMUST00000199177 1539 ntBASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Tmigd1-201ENSMUST00000072633 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Ccdc188F6WEU2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 AC154729.1-201ENSMUST00000224481 1501 ntBASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Mir6922-201ENSMUST00000185099 66 ntBASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Gm7255-201ENSMUST00000187371 908 ntBASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 AC155929.2-201ENSMUST00000218541 307 ntBASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Olfr170-203ENSMUST00000218837 1008 ntAPPRIS P2 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Gm6684-201ENSMUST00000053717 685 ntBASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Olfr170-201ENSMUST00000078603 1008 ntAPPRIS ALT1 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Gm43827-201ENSMUST00000200623 1390 ntBASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Gm28905-202ENSMUST00000219328 1377 ntTSL 5 BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ccdc188F6WEU2 Ces1e-203ENSMUST00000176282 1883 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Calcoco2-201ENSMUST00000068686 1621 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms