Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm11560-201ENSMUST00000117567 948 ntBASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm15285-201ENSMUST00000119271 473 ntBASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm12950-201ENSMUST00000121683 417 ntBASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm37048-201ENSMUST00000194827 5578 ntBASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm13668-201ENSMUST00000119237 1001 ntBASIC12□□□□□ -0.49
Trim29Q8R2Q0 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm24248-201ENSMUST00000157321 322 ntBASIC12□□□□□ -0.49
Trim29Q8R2Q0 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm5801-201ENSMUST00000182247 780 ntBASIC12□□□□□ -0.49
Trim29Q8R2Q0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm44498-201ENSMUST00000199509 111 ntBASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim29Q8R2Q0 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.99□□□□□ -0.49
Trim29Q8R2Q0 Gm11544-201ENSMUST00000120215 382 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms