Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 1700013D24Rik-201ENSMUST00000112537 535 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm12817-201ENSMUST00000119622 610 ntBASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm25842-201ENSMUST00000122590 322 ntBASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm25687-201ENSMUST00000175442 241 ntBASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm5435-201ENSMUST00000179295 1150 ntBASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm29471-201ENSMUST00000190527 700 ntBASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm31698-201ENSMUST00000214227 430 ntTSL 2 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm29961-202ENSMUST00000215431 637 ntTSL 5 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm13178-201ENSMUST00000036876 1227 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ccdc188F6WEU2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Gm24471-201ENSMUST00000104485 131 ntBASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Gm15895-201ENSMUST00000157018 731 ntTSL 3 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Gm26356-201ENSMUST00000158217 283 ntBASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Gm43110-201ENSMUST00000198877 226 ntBASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Gm42710-201ENSMUST00000200608 985 ntBASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Gm38941-201ENSMUST00000208606 529 ntBASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Gm16475-202ENSMUST00000209033 528 ntBASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 AC154687.1-201ENSMUST00000224875 677 ntBASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Psme1-201ENSMUST00000089619 711 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Cd1d2-203ENSMUST00000194208 1527 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Depdc1b-205ENSMUST00000171178 1404 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Gm14264-201ENSMUST00000147141 1864 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccdc188F6WEU2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccdc188F6WEU2 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms