Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.05■□□□□ 0.8
Crlf3Q9Z2L7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Crlf3Q9Z2L7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Crlf3Q9Z2L7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.05■□□□□ 0.8
Crlf3Q9Z2L7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Crlf3Q9Z2L7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.05■□□□□ 0.8
Crlf3Q9Z2L7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Crlf3Q9Z2L7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Crlf3Q9Z2L7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Crlf3Q9Z2L7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Crlf3Q9Z2L7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Crlf3Q9Z2L7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Crlf3Q9Z2L7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Crlf3Q9Z2L7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.02■□□□□ 0.8
Crlf3Q9Z2L7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Crlf3Q9Z2L7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.02■□□□□ 0.8
Crlf3Q9Z2L7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Crlf3Q9Z2L7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Crlf3Q9Z2L7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
Crlf3Q9Z2L7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Crlf3Q9Z2L7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Crlf3Q9Z2L7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Crlf3Q9Z2L7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Crlf3Q9Z2L7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Crlf3Q9Z2L7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Crlf3Q9Z2L7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20■□□□□ 0.79
Crlf3Q9Z2L7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20■□□□□ 0.79
Crlf3Q9Z2L7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Crlf3Q9Z2L7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crlf3Q9Z2L7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Crlf3Q9Z2L7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crlf3Q9Z2L7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.98■□□□□ 0.79
Crlf3Q9Z2L7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crlf3Q9Z2L7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crlf3Q9Z2L7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.98■□□□□ 0.79
Crlf3Q9Z2L7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Crlf3Q9Z2L7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Crlf3Q9Z2L7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Crlf3Q9Z2L7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Crlf3Q9Z2L7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Crlf3Q9Z2L7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Crlf3Q9Z2L7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Crlf3Q9Z2L7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.96■□□□□ 0.79
Crlf3Q9Z2L7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Crlf3Q9Z2L7 Gm15820-201ENSMUST00000201566 728 ntBASIC19.96■□□□□ 0.79
Crlf3Q9Z2L7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms