Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Gm9959-201ENSMUST00000068277 390 ntBASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rcl1Q9JJT0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Gm14117-201ENSMUST00000122417 843 ntBASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Gm45102-201ENSMUST00000207427 857 ntBASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rcl1Q9JJT0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.71■□□□□ 0.26
Rcl1Q9JJT0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rcl1Q9JJT0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 Etf1-202ENSMUST00000180351 108 ntBASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rcl1Q9JJT0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.68■□□□□ 0.26
Rcl1Q9JJT0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rcl1Q9JJT0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.68■□□□□ 0.26
Rcl1Q9JJT0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.68■□□□□ 0.26
Rcl1Q9JJT0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rcl1Q9JJT0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rcl1Q9JJT0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rcl1Q9JJT0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rcl1Q9JJT0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.67■□□□□ 0.26
Rcl1Q9JJT0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Rcl1Q9JJT0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rcl1Q9JJT0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rcl1Q9JJT0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rcl1Q9JJT0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rcl1Q9JJT0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rcl1Q9JJT0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.64■□□□□ 0.25
Rcl1Q9JJT0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms