Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap3s1Q9DCR2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap3s1Q9DCR2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap3s1Q9DCR2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap3s1Q9DCR2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ap3s1Q9DCR2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.72■□□□□ 0.43
Ap3s1Q9DCR2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ap3s1Q9DCR2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ap3s1Q9DCR2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ap3s1Q9DCR2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Ap3s1Q9DCR2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ap3s1Q9DCR2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Ap3s1Q9DCR2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap3s1Q9DCR2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap3s1Q9DCR2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap3s1Q9DCR2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Golph3-205ENSMUST00000228671 2842 ntBASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap3s1Q9DCR2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.64■□□□□ 0.42
Ap3s1Q9DCR2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ap3s1Q9DCR2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ap3s1Q9DCR2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Ap3s1Q9DCR2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ap3s1Q9DCR2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ap3s1Q9DCR2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ap3s1Q9DCR2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms