Protein–RNA interactions for Protein: Q9D0R8

Lsm12, Protein LSM12 homolog, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm12Q9D0R8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lsm12Q9D0R8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm12Q9D0R8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lsm12Q9D0R8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm12Q9D0R8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm12Q9D0R8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm12Q9D0R8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm12Q9D0R8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm12Q9D0R8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm12Q9D0R8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm12Q9D0R8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm12Q9D0R8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm12Q9D0R8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm12Q9D0R8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm12Q9D0R8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm12Q9D0R8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm12Q9D0R8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm12Q9D0R8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm12Q9D0R8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm12Q9D0R8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lsm12Q9D0R8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm12Q9D0R8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lsm12Q9D0R8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Gm13238-201ENSMUST00000117655 780 ntBASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm12Q9D0R8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm12Q9D0R8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
Lsm12Q9D0R8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lsm12Q9D0R8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm12Q9D0R8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm12Q9D0R8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm12Q9D0R8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm12Q9D0R8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm12Q9D0R8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm12Q9D0R8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm12Q9D0R8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm12Q9D0R8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Lsm12Q9D0R8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm12Q9D0R8 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.37■□□□□ 0.69
Lsm12Q9D0R8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lsm12Q9D0R8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm12Q9D0R8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm12Q9D0R8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Gm10399-202ENSMUST00000202768 748 ntBASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm12Q9D0R8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm12Q9D0R8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Lsm12Q9D0R8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm12Q9D0R8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms