Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gm10420-201ENSMUST00000121713 882 ntBASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcfc1r1Q9CYQ5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hcfc1r1Q9CYQ5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hcfc1r1Q9CYQ5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcfc1r1Q9CYQ5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcfc1r1Q9CYQ5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hcfc1r1Q9CYQ5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcfc1r1Q9CYQ5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gm12366-201ENSMUST00000121722 873 ntBASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gm5786-201ENSMUST00000085368 882 ntBASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1r1Q9CYQ5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1r1Q9CYQ5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Hcfc1r1Q9CYQ5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc1r1Q9CYQ5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc1r1Q9CYQ5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc1r1Q9CYQ5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Hcfc1r1Q9CYQ5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.17■□□□□ 0.34
Hcfc1r1Q9CYQ5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hcfc1r1Q9CYQ5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1r1Q9CYQ5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms