Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ska1Q9CPV1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ska1Q9CPV1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ska1Q9CPV1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska1Q9CPV1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.67■□□□□ 0.58
Ska1Q9CPV1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ska1Q9CPV1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ska1Q9CPV1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Ska1Q9CPV1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ska1Q9CPV1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska1Q9CPV1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.65■□□□□ 0.58
Ska1Q9CPV1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.65■□□□□ 0.58
Ska1Q9CPV1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ska1Q9CPV1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska1Q9CPV1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska1Q9CPV1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska1Q9CPV1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Ska1Q9CPV1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ska1Q9CPV1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska1Q9CPV1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska1Q9CPV1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.64■□□□□ 0.57
Ska1Q9CPV1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.64■□□□□ 0.57
Ska1Q9CPV1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ska1Q9CPV1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.64■□□□□ 0.57
Ska1Q9CPV1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska1Q9CPV1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska1Q9CPV1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska1Q9CPV1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ska1Q9CPV1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.63■□□□□ 0.57
Ska1Q9CPV1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ska1Q9CPV1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska1Q9CPV1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska1Q9CPV1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska1Q9CPV1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska1Q9CPV1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska1Q9CPV1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska1Q9CPV1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ska1Q9CPV1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ska1Q9CPV1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ska1Q9CPV1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms