Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.93■□□□□ 0.46
Krt88Q9CPR6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.93■□□□□ 0.46
Krt88Q9CPR6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt88Q9CPR6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt88Q9CPR6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt88Q9CPR6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt88Q9CPR6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Krt88Q9CPR6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt88Q9CPR6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt88Q9CPR6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.9■□□□□ 0.46
Krt88Q9CPR6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Krt88Q9CPR6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Krt88Q9CPR6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.89■□□□□ 0.46
Krt88Q9CPR6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Krt88Q9CPR6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.89■□□□□ 0.46
Krt88Q9CPR6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
Krt88Q9CPR6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt88Q9CPR6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt88Q9CPR6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt88Q9CPR6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt88Q9CPR6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Krt88Q9CPR6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.88■□□□□ 0.45
Krt88Q9CPR6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Krt88Q9CPR6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt88Q9CPR6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt88Q9CPR6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt88Q9CPR6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.86■□□□□ 0.45
Krt88Q9CPR6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.86■□□□□ 0.45
Krt88Q9CPR6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.86■□□□□ 0.45
Krt88Q9CPR6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.86■□□□□ 0.45
Krt88Q9CPR6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Krt88Q9CPR6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms